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A cautionary tale on the effects of different covariance structures in linear mixed effects modeling of fMRI data.
van der Horn, Harm Jan; Erhardt, Erik B; Dodd, Andrew B; Nathaniel, Upasana; Wick, Tracey V; McQuaid, Jessica R; Ryman, Sephira G; Vakhtin, Andrei A; Meier, Timothy B; Mayer, Andrew R.
Affiliation
  • van der Horn HJ; The Mind Research Network/LBERI, Albuquerque, New Mexico, USA.
  • Erhardt EB; Department of Mathematics and Statistics, University of New Mexico, Albuquerque, New Mexico, USA.
  • Dodd AB; The Mind Research Network/LBERI, Albuquerque, New Mexico, USA.
  • Nathaniel U; The Mind Research Network/LBERI, Albuquerque, New Mexico, USA.
  • Wick TV; The Mind Research Network/LBERI, Albuquerque, New Mexico, USA.
  • McQuaid JR; The Mind Research Network/LBERI, Albuquerque, New Mexico, USA.
  • Ryman SG; The Mind Research Network/LBERI, Albuquerque, New Mexico, USA.
  • Vakhtin AA; The Mind Research Network/LBERI, Albuquerque, New Mexico, USA.
  • Meier TB; Department of Neurosurgery, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
  • Mayer AR; Department of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Hum Brain Mapp ; 45(7): e26699, 2024 May.
Article in En | MEDLINE | ID: mdl-38726907
ABSTRACT
With the steadily increasing abundance of longitudinal neuroimaging studies with large sample sizes and multiple repeated measures, questions arise regarding the appropriate modeling of variance and covariance. The current study examined the influence of standard classes of variance-covariance structures in linear mixed effects (LME) modeling of fMRI data from patients with pediatric mild traumatic brain injury (pmTBI; N = 181) and healthy controls (N = 162). During two visits, participants performed a cognitive control fMRI paradigm that compared congruent and incongruent stimuli. The hemodynamic response function was parsed into peak and late peak phases. Data were analyzed with a 4-way (GROUP×VISIT×CONGRUENCY×PHASE) LME using AFNI's 3dLME and compound symmetry (CS), autoregressive process of order 1 (AR1), and unstructured (UN) variance-covariance matrices. Voxel-wise results dramatically varied both within the cognitive control network (UN>CS for CONGRUENCY effect) and broader brain regions (CS>UN for GROUPVISIT) depending on the variance-covariance matrix that was selected. Additional testing indicated that both model fit and estimated standard error were superior for the UN matrix, likely as a result of the modeling of individual terms. In summary, current findings suggest that the interpretation of results from complex designs is highly dependent on the selection of the variance-covariance structure using LME modeling.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Magnetic Resonance Imaging Limits: Adolescent / Child / Female / Humans / Male Language: En Journal: Hum Brain Mapp Journal subject: CEREBRO Year: 2024 Document type: Article Affiliation country: Country of publication:

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Magnetic Resonance Imaging Limits: Adolescent / Child / Female / Humans / Male Language: En Journal: Hum Brain Mapp Journal subject: CEREBRO Year: 2024 Document type: Article Affiliation country: Country of publication: